Publications

Publications

A complete list of my publications can be found on my Google Scholar or ORCID.

Selected papers

Naga Karthik, E.*, Valošek, J.*, Smith, A.C., Pfyffer, D., Schading-Sassenhausen, S., Farner, L., Weber, K.A., Freund, P., & Cohen-Adad, J. (2024). SCIseg: Automatic Segmentation of Intramedullary Lesions in Spinal Cord Injury on T2-weighted MRI Scans. Radiol. Artif. Intell. DOI: 10.1148/ryai.240005.

* Shared co-first authorship – authors contributed equally

Naga Karthik, E.*, Valošek, J.*, ..., & Cohen-Adad, J. (2024). SCIsegV2: A Universal Tool for Segmentation of Intramedullary Lesions in Spinal Cord Injury. MICCAI-AMAI 2024 Workshop. DOI: 10.48550/arXiv.2407.17265.

* Shared co-first authorship – authors contributed equally

Valošek, J., Mathieu, T., Schlienger, R., Kowalczyk, O.S., & Cohen-Adad, J. (2024). Automatic Segmentation of the Spinal Cord Nerve Rootlets. Imaging Neuroscience. DOI: 10.1162/imag_a_00218.

Valošek, J. & Cohen-Adad, J. (2024). Reproducible Spinal Cord Quantitative MRI Analysis with the Spinal Cord Toolbox. Magnetic Resonance in Medical Sciences. DOI: 10.2463/mrms.rev.2023-0159.

Valošek, J.*, Bédard, S.*, Keřkovský, M., Rohan, T., & Cohen-Adad, J. (2024). A database of the healthy human spinal cord morphometry in the PAM50 template space. Imaging Neuroscience, 2, 1-15. DOI: 10.1162/imag_a_00075.

* Shared co-first authorship – authors contributed equally

👉 For interactive figures, visit the NeuroLibre preprint.

Valošek, J., Labounek, R., ... & Svatkova, A. (2021). Diffusion magnetic resonance imaging reveals tract‐specific microstructural correlates of electrophysiological impairments in non‐myelopathic and myelopathic spinal cord compression. European Journal of Neurology, 28(11), 3784-3797. DOI: 10.1111/ene.15027.

Horak, T., Horakova, M., Svatkova, A., Kadanka, Z., Kudlicka, P., Valosek, J., ... & Bednarik, P. (2021). In vivo molecular signatures of cervical spinal cord pathology in degenerative compression. Journal of Neurotrauma, 38(21), 2999-3010. DOI: 10.1089/neu.2021.0151.

Cohen-Adad, J., Alonso-Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., ..., Valošek, J., ... & Xu, J. (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature protocols, 16(10), 4611-4632. DOI: 10.1038/s41596-021-00588-0.

Cohen-Adad, J., Alonso-Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., ..., Valošek, J., ... & Xu, J. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific data, 8(1), 219. DOI: 10.1038/s41597-021-00941-8.

Arkhipova, A., Hok, P., Valošek, J., Trnečková, M., Všetičková, G., Coufalová, G., ... & Hluštík, P. (2021). Changes in brain responses to music and non-music sounds following creativity training within the “different hearing” program. Frontiers in Neuroscience, 15, 703620. DOI: 10.3389/fnins.2021.703620.

Labounek, R., Valošek, J., Horák, T., Svátková, A., Bednařík, P., Vojtíšek, L., ... & Hluštík, P. (2020). HARDI-ZOOMit protocol improves specificity to microstructural changes in presymptomatic myelopathy. Scientific reports, 10(1), 17529. DOI: 10.1038/s41598-020-70297-3.

Vastik, M., Hok, P., Valosek, J., Hlustik, P., Mensikova, K., & Kanovsky, P. (2017). Freezing of gait is associated with cortical thinning in mesial frontal cortex. Biomedical Papers, 161(4), 389-396. DOI: 10.5507/bp.2017.035.